Akansha Pandit

3 Questions 6 Answers 0 Followers

Questions related from Akansha Pandit

How to plot force vs time plot and force-extension plot from Steered MD Simulation data?

I have done steered MD of RNA and now trying to figure out the analysis of the data obtained by the simulation.. I wanted to know on how to plot the force vs time plot and force-extension plot...

27 October 2021 4,943 2 View

How to make index file in gromacs for nitrogen bases only?

I am working on GROMACS software and I wanted to know, how can select only nitrogen bases for making index file in GROMACS.. I am stuck.. Can anyone please help me.. Is there any script or command...

11 July 2021 8,298 2 View

H-Bond Occupancy

Can Anybody help me on how to find Hydrogen-Bond occupancy of RNA unfolding. Which software can be used for the same.

01 January 1970 1,772 2 View