Which outgroup can I use for Fusarium cerealis, Fusarium delphinoides and Alternaria alternata?
For Fusarium delphinoides - F. domesticum,
for F. cerealis - F. culmorum is a sister clade, F. poae is a bit more distant.
For A. allternata - A. solani, A. brassicae.
Dear Kamal Sadeghi,
1.
Fusarium cerealis (= Fusarium crookwellense L.W. Burgess, P.E. Nelson & Toussoun, Transactions of the British Mycological Society 79 (3): 498 (1982) - A sister clade is F. culmorum, similarly F. graminearum.
An outgroup is: Fusarium solani (Mart.) Sacc.
2.
Fusarium delphinoides is a pathogen of the cactus-like African species Hoodia gordonii (Apocynaceae). Phylogenetic analyses based on combined sequences of the internal transcribed spacer region, LSU rDNA and partial sequences of the elongation factor 1-alpha and beta-tubulin genes identified a clade of several species producing predominately 2-septate macroconidia as the reciprocally monophyletic sister of F. dimerum. The basal sister group of the two aforementioned clades includes Fusarium lunatum .
An outgroup is: Fusarium tricinctum (Corda) Sacc. and Fusarium avenaceum (Fr.) Sacc.
3.
Alternaria alternata
Alternaria arborescens and Alternaria tenuissima formed monophyletic sister group to A. alternata
An outgroup is: Alternaria brassicicola (Schwein.) Wiltshire, (1947)
Dears Dr. Ignatov and Ostry Thank you for your kindly guidance. 'that was so useful.
- Badges
- Science topic
- Similar topics
- Biological Science
- Biota
- Eukaryota
- Fungi