I currently have knowledge of 5 algorithms used for clustering protein-protein interaction [PPI] networks:-

a) FAG-EC

b) MCODE

c) EAGLE

d) MOMA (Mining overlapping modules by agglomerating)

e) LF-PIN (Link to article given)

Has anyone compared these 5 algorithms for clustering a disease network? I wish to know opinions on which works best for what conditions (for networks without directed edges). Thanks!

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3854919/

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