As we all know, the wavefunction of such a particle has a certain number n of zeros due to boundary conditions. If at these points the wavefunction is zero, then, since the probability of finding the particle there is equal to the square of the wavefunction, it follows that the particle cannot ever be there. However, there is nothing physical at those points that would prevent the particle from being there at some instant.
Moreover, a wavefunction psi_n corresponds to an energy level E_n. As you change to a higher energy level, the index n grows, and we have more nodes of the wavefunction; i.e., more places where the particle cannot be. Again, there is nothing physical at these points.