Hi,

also you can use MODIStsp packagein R. Then you can automatically download some MODIS products, resize and pre-process them.

For the automated download of MODIS data, you may check pyModis which is a Free and Open Source Python based library to work with MODIS data (http://www.pymodis.org/). It greatly simplifies the download and processing of MODIS time series. In the near future pyModis will be updated again to run even faster.

Then you can use the downloaded and preprocessed MODIS data easily in "any" GIS.

http://www.pymodis.org/

There are a number of options to access MODIS Vegetation Indices data for your study area. I have added only three options here:

1. EarthExplorer USGS - http://earthexplorer.usgs.gov/

2. NASA Search Data - https://search.earthdata.nasa.gov/

3. NASA's Reverb ECHO - http://reverb.echo.nasa.gov/

Following are the Steps:

For EarthExplorer

1. Go to http://earthexplorer.usgs.gov/

2. Type in the name of the study area under 'Address/Place' option, e.g., Nigeria

3. Go to the Data Sets > NASA LPDAAC Collection > MODIS Vegetation Indices

4. Click on the Results Tab and login to download the images

For NASA Search Data

1. Go to https://search.earthdata.nasa.gov/

2. Type 'MODIS Vegetation Indices' in the search box

3. You will get around 148 Matching Collections

4. Create a Polygon for your study area using the 'Spatial' tab option

5. Now your Matching Collection will reduce to some 29 Results

6. Click on the '+' option to add the Collection you are looking for

7. Click on View Project

8. Prepare for browsing the images on a time scale

9. Login to Download the Images

Alternatively if you want you can follow the online guides via youtube where detailed steps are provided to access data via these links.

https://www.youtube.com/watch?v=ATuZf614pbI

https://www.youtube.com/watch?v=CVsgjp9jRyA

https://www.youtube.com/watch?v=DNssoejxdVE

MRT  tool by  NASA or USGS is a effective tool to transform these data.

Hi.

First you need to select the MODIS product you need. For what you said, MOD13Q1 is a god choice [0]. If you are not sure, you can check this guide [1]

Next you need to select the study area. You can use the map in this webpage [2] to get the ID of the MODIS tiles you need. For example, h18v08.

Then, you need to download the data. I am a Linux user, so, I used WGET to do it. Basically WGET creates a local copy of the NASA website [5]. You can apply filters by file name to select specific time periods or tiles. You can use this shell script as an example [3]. Besides, this script downloads in parallel using other Linux tools [4].

Once you have the data, if you install the GDAL library[6] with HDF support enabled, you can read the data with many GIS or statistical software; for example, QGIS[7] or R[8]. NASA also provides viewer software as well [9] which do not require GDAL. I think any of these software allow you to extract the data you need.

I hope this helps!

[0] https://lpdaac.usgs.gov/dataset_discovery/modis/modis_products_table/mod13q1

[1] http://modis-sr.ltdri.org/guide/MOD09_UserGuide_v1_3.pdf

[2] http://modis-land.gsfc.nasa.gov/MODLAND_grid.html

[3] https://github.com/ifgi/scalable-spatial-temporal-BFAST/blob/master/downloaddata.sh

[4] https://github.com/ifgi/scalable-spatial-temporal-BFAST/blob/master/installParallel.sh

[5] http://e4ftl01.cr.usgs.gov/MOLT/MOD13Q1.005/

[6] http://gdal.org/

[7] http://qgis.org/en/site/

[8] http://cran.r-project.org/

[9] http://www.giss.nasa.gov/tools/panoply/

Hi,

also you can use MODIStsp packagein R. Then you can automatically download some MODIS products, resize and pre-process them.

Hi,

You can use AppEEARS tool by USGS where you can input the shapefile of area of interest, you can reproject the data and specify the dates, years and product you want to download. Please see these links.

https://lpdaacsvc.cr.usgs.gov/appeears/

https://lpdaac.usgs.gov/resources/e-learning/using-nasas-appeears-slice-and-dice-big-earth-data/