The analysis of the mass spectrum of an organic compound is not an easy task and needs high expertise. Is there any free software that can facilitate the prediction of the fragmentation acquired from the mass spectroscopy?
The book titled "Spectroscopic Identification of Organic Compounds" authored by Silverstein is highly valuable as well as I studied it extensively during the performing of my Ph.D. thesis. I think that the presence of robust software may help and confirm the prediction of the acquired data.
You can "predict" it on the basis of chemical knowledge. Check a book authores by Silverstein combine it with self-analysis of simple MS spectra for example from NIST or chemspider in 1 month you will not need any software ;)
The book titled "Spectroscopic Identification of Organic Compounds" authored by Silverstein is highly valuable as well as I studied it extensively during the performing of my Ph.D. thesis. I think that the presence of robust software may help and confirm the prediction of the acquired data.
Interpretation of the mass spectra is not easy. In my opinion, the libraries of the reference mass spectra - in general - are very useful for quick interpretation of the investigated mass spectra. But, the general knowledge of the mass fragmentation processes of the organic compounds is always necessary in each case. Also, more information about the compounds investigated is very important.
I hope that our information about the interpretation of the mass spectra will be helpful and after receivng more details about the MS problems (for example: what kind of the compounds are investigated by Yasser), we could help in the solving Yasser's MS problems.
Predict Mass Fragmentation - MS Fragmentation Software. Mass spec fragmentation calculator to predict experimental mass spectrum fragments. Predict common MS fragments from structures and review key fragmentation pathways.