Single layers of MoS2 deposited on ITO appear as high as 4-5 nm in AFM. I'm pretty confident this is an overstimation since the Raman and photoluminescence spectra show the single layer nature of the sample.
The AFM scanner is well-calibrated so that is not the problem.
I wonder if the differences in tip-sample interaction, or water or other adlayers can be responsible for this inconsistency in AFM results.
Has anyone observed this issue?