How to use VCFtools?

More Benjamin Karikari's questions See All

How to calculate SSR Band Size?

Can anyone guide me on how compute the band size, for instance, three bands (270, 280 and 295 bps) from the same germplasm with the same SSR primer? The above three bands were identified in the...

08 September 2018 489 0 View

I want to learn how to construct genes coexpression network, can anyone here guide me through?

How can I construct gene(s) expression network which I need urgently in for thesis writing?

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Why should we choose deep learning to machine learning? Why is CNN better for image classification? Can I get Typical Answer?

What Characteristics makes CNN work better?

03 March 2021 1,458 4 View

What are some of the research gaps in machine learning and artificial intelligence in africa?

i would to know some of the research gaps in the artificial intelligence field in most african countries.

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Enhanced Yellow Fluorescent Protein (Aequorea victoria) DNA sequence?

I am on the lookout for the Enhanced Yellow Fluorescent Protein (Aequorea victoria) DNA sequence. Does anyone know where I can find it? Thank you in advance

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Anyone plz suggest relevant topic for research in image processing+Deep learning.?

I have selected brain tumor images ...but now found that already lots of research done n this topic.

03 March 2021 5,774 3 View

What are the values needed for gabor filter's parameter for cifar10 data?

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How to increase a model accuracy ?

dear community, my model is based feature extraction from non stationary signals using discrete Wavelet Transform and then using statistical features then machine learning classifiers in order to...

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Can you share me how teacher education is managed in your respective national educational system?

I feel that the practice in teacher education in my country is below the expected performance level due to very poor management system. Hope I will learn something from your experiences.

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Can NFL theorem be valid in infinite search space in ML?

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How to calculate Total Flavonoid?

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Is it possible for two human neuronal cell lines to have different gene sequence for the same protein?

I am looking at the ATP1A2 (Sodium/Potassium ATPase alpha subunit 2) in two human neuronal cell lines. Expression levels of this protein seems to be almost equal when detected by one antibody....

01 March 2021 3,607 3 View

Yousif Yaqoob Yousif

I do not know how

Nikita Zrelovs

Greetings,

It is not clear from your question what exactly is your data and what are you trying to get rid of. If you already have a list of SNPs/Indels for your "very large genomic sequence" in the variant call format (*.vcf), consult the official documentation of the tool (https://vcftools.github.io/man_latest.html) to learn about the features and usage.