How to simulate genetic data in metacommunity?

More Xinghu Qin's questions See All

How to simulate genotype data in metacommunity? Any simulation tools or R package can implement metacommunity genetic simulation?

Anyone know how to generate genetic data in metacommunity?

07 August 2017 536 2 View

When I simulate for S parameters using ADS, I have faced this issue that I have attached. Please anyone clarify me?

...

31 July 2024 1,671 3 View

Wrong out put for gmx x2top?

Dear users, I would like to simulate a zeolite structure in gromacs. I got the .cif file from IZA expanded in one direction in Materials Studio and exported a .pdb file. However, when I want to...

24 July 2024 367 4 View

Can a private laptop with 16GB RAM and Intel i5-1235U 1.3 GHz processor be used for WRF simulation with a 12*12 km domain?

I want to simulate WRF for a 12*12 km domain size. I want to run LSM and BSM models with a 5 minutes time interval. My laptop specification is 16GB RAM and Intel i5-1235U 1.3 GHz processor. Can I...

13 July 2024 2,037 0 View

What is the best software for simulation of mode locked diode laser?

Hi Dear All I would like to simulate a mode locked semiconductor laser. Does anyone know what is the best software to do it?

06 July 2024 1,648 4 View

How to find experimental demonstrations are available on MEC research using OMNET?

I attempted to find a tutorial on YouTube but couldn't locate it. Could anyone guide me on how to view simulation results for Mobile Edge Computing using the OMNET++ simulator?

06 July 2024 6,229 0 View

Is there any way to calculate whole genome similarity of organism without the whole genome sequencing ?

is there any ways that i can find genome similarity of an organism without whole genome sequencing ,like using maths formulas or experimental progress ?

05 July 2024 4,070 3 View

Can SimaPro be used to simulate/analyse Biodegradation of Specimens?

I am looking at ways to investigate the biodegradation of 3D printed specimen as part of my research. To what extent can SimaPro be used to do this? The idea is to demonstrate the biodegradation...

02 July 2024 2,730 2 View

How validate the dynamic molecualr simulation with experimental data?

I used forcite module of Material Studio software to simulate the dissolution of zinc production waste in deep eutectic solvent. UFF force field has been used for the optimization of molecules,...

02 July 2024 7,494 1 View

Can anyone please suggest me some free software similar to SCAPS where I can simulate at least 15 layers?

I am trying to simulate a new solar cell which has almost 15 layers. But SCAPS has only 7 layers.

01 July 2024 9,135 2 View

Has anyone simulated Argon plasma jet in Comsol?

Hello, Has anyone successfully modeled 2D argon plasma jet using the COMSOL? I would greatly appreciate any guidance on this matter.

30 June 2024 5,597 0 View

Mohammad Tarek

you may try metacom package

Xinghu Qin

Thanks, but it only generates species data, not genetic data.

Noor Edan Jarad

https://bmcbioinformatics.biomedcentral.com/articles

https://www.mcmlter.org/.../simulation-based-approach-understand-how-metacommu

Julio Cesar Canales-Delgadillo

Geneland is capable to simulate multilocus genotype data and works under R:

G. Guillot and F. Santos A computer program to simulate multilocus genotype data with spatially auto-correlated allele frequencies. Molecular Ecology Resources, 9(4), 1112-1120, 2009.