How to rescue corrupted GROMACS tragectory XTC file ..?

Basavraj Khanppnavar @Basavraj_Khanppnavar3

11 November 2017 0 2K Report

I am trying to analyse gromacs output XTC tragectory file (100 ns) using: trjconv -s md_0_1.tpr -f md_0_1.xtc -o md_0_1_noPBC.xtc -pbc mol -ur compact

I get fatal error:

"" Magic Number Error in XTC file (read -1973443871, should be 1995)"" after frame number 97362.

However, I am able to carryout processing of XTC trajectory file after this particular frame, suggesting some issue with this particular frame only. ....Can anyone suggest me...How can i skip or delete this particular corrupted frame and rescue rest of data....???

Thanks in advance

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