I was trying to dock a few compounds with PyRx 0.8 (AutoDock). For the last two days, whenever I try to generate the grid box, it is generated with spacing (Angstrom)- 0.3750.
If I try to run the docking with spacing, AutoDock shows few errors and the job does not start. I tried reinstalling the software. After the reinstallation, the first docking was done nicely. But after that, I am facing this error again.
Is there any way to get rid of this?
You are running the Autodock in remote mode. It often creates problems. Try installing Autodock 4 in your system and then set the path to the executable from Edit -> Preferences and choose the Autodock execution mode to local by clicking the Radio button down there in the Controls wizard. I hope this will solve your problem.
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