How to read fasta file in R program?

How to analyze a particular region of my simulation box in GROMACS?

Hi, I am using GROMACS 5.1.4 to simulate water in contact with a surface. I am only interested to calculate some properties of water near the surface. Let's say at a distance of x nm from the...

03 March 2021 9,989 2 View

How to get onecolumn document from standard IEEE ACCESS LateX template?

I have prepared a manuscript in IEEE Latex template, but for some purpose, I need to prepare a word file as well (detailed format is not required). Compared to two column .tex file, one column...

02 March 2021 1,830 3 View

How to normalise data on OPM package from R Studio ?

Good afternoon, I recently used OmniLog from BIOLOG for my experimentations : I tested the metabolism of different strains on 2 types of plates. I have 16 strains of 3 different groups...

02 March 2021 3,584 1 View

How can the modification of garden soil cause global warming?

Hello, I am working on a soil project and I found a primary research article that tests how the modification of agricultural soil can cause global warming, using a thermal collector, however I...

02 March 2021 7,161 3 View

Does anyone know how to plot my station to a section plot on Ocean Data View (ODV)?

I made a vertical section plot with WOA .nc file on ODV, and now I want to plot my stations (csv. file) in it. Does anyone know how to import my points to the section? They are two different...

01 March 2021 3,610 1 View

Which is suitable for use with Python? MySQL or SQL Server?

Which is suitable for use with Python? MySQL or SQL Server? What is your suggestion?

01 March 2021 3,422 3 View

Does anyone know to clarify these changes?

01 March 2021 1,290 2 View

How can I convert .vesta file to a .cif file?

I've used the "export data" option in Vesta software to convert my unit cell into a cif file however when I use that cif in atomsk it shows error such as "can't read the position of atom 0". If I...

28 February 2021 4,966 3 View

How to plot the probability paper of Gumbel distribution using R programing?

In R-studio, there are many commands of Gumbel package. Arguments are also different. I`m asking about the alpha parameter of the Copula which must be greater than 1. If this is the one used to...

25 February 2021 5,229 3 View

How can we use a hybrid element in Abaqus Dynamic/Explicit for impressible materials?

Hi, all! How can we use a hybrid element in Abaqus Dynamic/Explicit for impressible materials? I have not find the choice for explicit element in Abaqus CAE. I am wondering whether it is possible...

25 February 2021 9,936 2 View

Abhijeet Singh

You have to install package to do that... There are many you can find which serves the purpose...

library(Biostrings) - readDNAStringSet function

library(seqinr)- read.fasta function

etc....

Sureshkumar v.

Mohammed Hasan Nabeel Almashat

install.packages("seqinr")

library(seqinr)

After this, You can proceed with your coding.

Dear Dr. Abhijeet Singh and Mr. Sureshkumar v.

I am recording video how I installed packages. It is in Powerpoint I am attaching it. Pleas kindly check it.

https://stackoverflow.com/questions/26570912/error-in-installation-a-r-package

Check this.

Loubna Youssar

Mohammed Hasan Nabeel Almashat has Problem package installation. See that power point. While loading library, it was showing error.

Thanks for this correction. Unfortunately this PP does not work in my computer (I guess versions incompatibilities).

setwd(dir="C:/Users/user_name/Documents/dengue")

set

user_name = Your system user name

Ex: setwd(dir="C:/Users/Admin/Documents/dengue")

I do not know if I do it as you mention or not.

please check the PP.

Thanks

setwd(dir = "C:/Users/Hasan Almashat/Documents/dengue/")

dengue

Unfortunately, It dose not work. Please check the photo I attached .

I am very grateful to you. It's a useful way.

Thank you very much