How to predict tRNA anti-codon?

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Adam B Shapiro

tRNAs have highly conserved motifs. You should be able to line up the sequence of your tRNA with known sequences to identify the anticodon. Here is a tRNA database.

http://trnadb.bioinf.uni-leipzig.de/DataOutput/

Chao Lei

thanks Adam! I had found a tool to predict anticodon, wish it's useful to anyone else.

http://lowelab.ucsc.edu/tRNAscan-SE/