Hi,
I had sequence of the tRNA while i don't know its anti-codon to cognate amino acid. is any good method to predict the anti-codon? thanks!
tRNAs have highly conserved motifs. You should be able to line up the sequence of your tRNA with known sequences to identify the anticodon. Here is a tRNA database.
http://trnadb.bioinf.uni-leipzig.de/DataOutput/
thanks Adam! I had found a tool to predict anticodon, wish it's useful to anyone else.
http://lowelab.ucsc.edu/tRNAscan-SE/
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