I have transgenic lines of arabidopsis expressing aequorin in the tonoplast, and am using them to determine calcium fluxes in week-old seedlings after certain treatments. The issue I am running into is that I am not sure if I am normalizing my readings from the luminometer to the summation of all the luminescence readings taken during the experiment, or only after discharging the aequorin with 2M CaCl2 in 20% EtOH. And if so, do I integrate those readings with respect to time or simply leave it as the sum? Thank you for any help, I appreciate it!

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