Hi, I am working with the RAD-seq data trying to speed up STACKS, specifically the ref_map.pl program, by using a computer cluster with multiple nodes and CPUs. The option -T (number of threads) in ref_map.pl specifies the number of CPUs to use but not the number of nodes, so once the maximum no. of CPUs on a single node is reached, the computational job is killed. Is there any way to make STACKS distinguish between the number of nodes and the numbers of CPUs?