Hello, I have two sequential restriction enzyme sites I have to use:

CTCGAGTCTAGA (respectively Xho I and Xba I).

They perform well in the same buffer, nevertheless I suspect my digestion is not complete because all the further steps in ligation are not working (I have already tried several variation of the ligation procedure).

I would like to digest first with on enzyme, do heat inactivation and then proceed with the second enzyme.

Does anyone know which is the best combination? I read that sometime first digsetion influences the second one.

Thanks a lot for any help and tip!

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