Hello, I have two sequential restriction enzyme sites I have to use:
CTCGAGTCTAGA (respectively Xho I and Xba I).
They perform well in the same buffer, nevertheless I suspect my digestion is not complete because all the further steps in ligation are not working (I have already tried several variation of the ligation procedure).
I would like to digest first with on enzyme, do heat inactivation and then proceed with the second enzyme.
Does anyone know which is the best combination? I read that sometime first digsetion influences the second one.
Thanks a lot for any help and tip!