Dear Ibrahim...

Here you will find some broad lines stated by @ Emine Dilsat Yegenoglu:

1. Prepare an Excel sheet includes your data. (You can use TXT files but I think xls is easier) I attached an example file for you. In example sheet, in first line, first number  is the number of your matrix (you need to check from the guide for the number of matrices and their means), second is number of the rows, third is number of columns and fourth number is 0 because there is no missing data in this data set.

2. open ntedit and import your xls file. You can name your samples in spreadsheet but I used to name them in this step (it's just a habit). Save your document as nts file.

3. open your file in NTSYS.

NTSYSpc:

Step 1:            Calculating similarity/dissimilary matrice

                       Similarity

                        SimQual

                        Input file {example.nts}

                        By rows {x}

                        Coefficient {JACCARD, DICE, etc}

                        Name Output file (examplejaccard i.e)

                        Compute

                       Step 2:            Performing hierarchical clustering using UPMGA

                       Clustering

                        SAHN

                        Input file {examplejaccard}

                        Output tree file {examplejaccardtree.nts}

                        Clustering method {UPGMA}

                        Compute

                        Click on the Dendrogram-bottom in the lower left corner of the window

                        Tree plot

                        Options

                        Plot Options

Note:

If these guide lines are helpful, that is will be fine! If not, write to me and I shall explained to you how to use MVSP for the same purpose, it is easy to go with!.

Best luck

Thank you very much