I am wondering, if there is any software or tool that I can use for calculating linkage disequilibrium in pair of gene using their observed frequencies. Any help will be appreciated.
Thanks in advance.
Thanks Safa, the paper is useful in understanding the background of these equations.
Dear Sandeep...
Check this link below, its helpful:
http://pbgworks.org/sites/pbgworks.org/files/measuresoflinkagedisequilibrium-111119214123-phpapp01_0.pdf
Best Luck
Thanks Ayoob. this is very informative.
You welcome sir.
Regards.
This may be useful
https://github.com/bvilhjal/ldpred
Thanks kumardeep, i will go through it.
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