I am doing a molecular dynamic simulation and I want to calculate angular distribution.How can I do that ?
Can that be done with vmd? if so I think I'll need a tcl-script.
Do you want to get the bond angle distribution? If so then you can use RINGS code. Which does it pretty well.
thank you very much for the reply
does the code work with organic molecules ?
should work with any kinds of molecules. You just need to make the proper data file (in POSCAR format) and input file with the right cutoff distances.
thanks I'll try
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