Hello everyone,
I have a series of microbiome results from metagenomic survey such as “bacterial abundance files”(tabular files, the first row is sample ID and the first column is bacteria species).
I have noticed that most of people recommend cytoscape, but I am a newbie of bioinformatics and have no idea about how to solve the data. So I would like to ask several questions:
1)Whether I could create the bacterial interaction network with only “bacterial abundance files” ?
2)It seems that I have failed to import the data files into cytoscape, how to convert the tabular files in proper way?