I am trying to run an all atom MD simulation of a disordered protein in solution to study its structural characterization. Could someone suggest me the best way to accurately model the starting structure from the protein sequence ?
Volkan Fındık
You may use Swiss Model for homology modeling.
https://swissmodel.expasy.org/
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Martin Klvana
Ab initio protein structure prediction?
https://zhanglab.ccmb.med.umich.edu/QUARK/
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