When I finished all the steps in Autodock vina, and then set up a receptor or ligand (Analyze→Docking→Show Interactions), it shows a memory error how can I fix it?
Waseem Ahmad Ansari
Hi Priyanka Nagu
First of all you can open ADT
Go->analyze->Docking-> open->.dlg file of selected complex
Go->analyze->Docking-> open-> macromolecule (Take by default)
Go->analyze->Docking-> open->show interaction
and other way
you can open your complex on Discovery studio and see the interaction in 3D and 2D structure
you can open your complex in Pymol and see bond interaction
If you want only 2D structure so you can go also Ligplot
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