I have a .pdb file with a protein structure prediction from Alphafold, and I want to highlight the existing Uniprot feature annotations (phosphorylation sites etc.) in the predicted structure. However, I can only get the protein mapping for existing crystal structures which only contain a specific part of the full protein sequence (see attached image, the crystal structure only contains amino acids highlighted in red). If I color for example the ATP binding Lysine (K), the ~285 amino acids that are missing in the crystal structure cause a frameshift, which leads to selection of the wrong amino acid (Glutamine 42) in the protein viewer. I wonder if someone can help me with this!

More Maurits Roorda's questions See All
Similar questions and discussions