My name is Emily Palmer and am looking at the effects of oxygen and temperature on amphipod egg size.
I am looking to perform PGLS analysis but require a nexus or newick file.
If anyone has any files of this nature available or have any suggestions of where I could obtain these files.
Thank you for your time and I look forward to hearing from you.
Kind regards,
Emily Palmer
To construe an overwhelming phylogeny of Hyalella in the Altiplano, looking at their full geographic course in the two fundamental Titicaca sub-bowls, essential satellite lakes, and other high-level water bodies close by; to check tree center point ages and date of colonization of the Lake by the different lineages, testing the hypothesis of the occasion of continuous intra-lacustrine radiation explicitly clades, and to test the occasion of mito-nuclear discordances and the consistency of progression data with morphological characters under a phylogenetic framework.
Dear Emily,
We published a few years ago a molecular phylogeny of Amphipoda https://www.sciencedirect.com/science/article/abs/pii/S1055790319305731
Various files including alignments and trees are available in the supp info or on Figshare (https://figshare.com/articles/dataset/The_late_blooming_amphipods_global_change_promoted_post-Jurassic_ecological_radiation_despite_Palaeozoic_origin/8241401/1)
I also attach a time-calibrated tree in newik format. Let me know if you have questions.
Denis
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