Here, i am using ImageJ associated with COMSTAT software which only reads lsm file format but i have my confocal raw data in lif file format so pls. suggest how to solve or convert lif file format to lsm file format.
You can use this macro for ImageJ or Fiji: Image Conversion Tool from MRI
http://dev.mri.cnrs.fr/projects/imagej-macros/wiki/Image_Conversion_Tools
Best wishes,
Ion.
Will it work?? Did you mean that, i need to install the macro imagJ for converting the lif format to lsm format....
It's work. Download MRI Image Conversion Tools.txt from url:
http://dev.mri.cnrs.fr/attachments/download/932/MRI_Image_Conversion_Tools.txt
After put it in folder macros/toolsets.
It isi necessary to put in folder plugins bioformat_package.jar. You can download it from:
http://downloads.openmicroscopy.org/bio-formats/5.0.8/artifacts/bioformats_package.jar
Restart ImageJ or Fiji,and select the "MRI Image Conversion Tools" toolset from the >> button of the ImageJ launcher.
the *?* button opens this help page
the Lif button runs the Lif2Tif conversion
the Lsm button runs the Lsm2Tif conversion
the Zvi button runs the Zvi2Tif conversion
Best wishes,
Ion.
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