Any good software to draw haplotype networks. I have tried Network software but I do not have Network publisher which is required to edit network?

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Rajesh M.K.

PopArt: http://popart.otago.ac.nz/index.shtml

Agostino Leone

http://www.cibiv.at/~greg/haploviewer HapView. Very easy to use. You have just to input your fasta and specify the sample names. N.B. you need phylip to run it.

Alternatively, if you are interest in R language, you can use the package "pegas".

Here some specifics: http://www.inside-r.org/packages/cran/pegas/docs/as.network.haploNet

Ashwini Keskar

hey thanks .. I tried using Poart and Hapview also. But in hapview i cannot load tree file. Dont know whats happening. Do I need to define A,B, C etc next to my taxa names?

Carolina Soliani

Hi!

I'm interested in using Popart to construct haplotype networks but it seems not possible to download the windows version from the official webpage. Does anyone knows if the site is not maintained anymore? Does anyone have instead the executable/installing file to share?

Thanks

Kiavash Golzarianpour

Dear Carolina Soliani

You should download stable version, link works.

http://popart.otago.ac.nz/software/popart-1.7.zip

Kiavash