Zeyneb Djeffal

5 Questions 3 Answers 0 Followers

Questions related from Zeyneb Djeffal

Recommendations for Analyzing Key Residues in Antibody-Epitope Interactions for Food-Derived Allergens?

Greetings, I have conducted in silico predictions of linear and conformational epitopes for several food-derived allergens, and I am keen to ascertain the pivotal residues involved in the...

29 October 2023 8,835 0 View

Absence of Conformational Epitopes in a Food Allergen Protein: A Case Study with Exclusively Linear Epitopes?

Greetings, Through my research on food allergen proteins of dietary origin, I have encountered an intriguing case where a particular protein exhibits solely linear epitopes. Surprisingly, no...

28 May 2023 2,884 0 View

Absence of Conformational Epitopes in a Food Allergen Protein: A Case Study with Exclusively Linear Epitopes?

Greetings, Through my research on food allergen proteins of dietary origin, I have encountered an intriguing case where a particular protein exhibits solely linear epitopes. Surprisingly, no...

27 May 2023 4,663 0 View

How to check the quality of the three-dimensional protein structure models predicted by LOMETS?

Greetings, I made the prediction of the three-dimensional structure of certain allergenic proteins using LOMETS server, now I want to check the quality of the models obtained, what do you suggest...

21 February 2020 8,247 1 View

How to remove the solvent box from the em.pdb file after energy minimization in GROMACS?

Greetings all, I converted the .gro file to a .pdb file using the command: gmx editconf -f em.gro -o em.pdb To validate the minimized energy structure and calculate the RMSD using pymol, I need...

16 January 2020 9,327 4 View