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I have generated a complex of antigen and antibody using haddock and used that cluster for MD run using Gromacs. Now I need to find out the inter hydrogen bonds formed between antigen and antibody...
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I have this protein with 287 residues for which the instability index is 56 as computed by Protparam, this is more than 40 so it makes this protein unstable. I want to know about the reliability...
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