Uddalok Jana

3 Questions 3 Answers 0 Followers

Questions related from Uddalok Jana

What details should be followed in MEGA-X for the Multiple Sequence Alignment of 16S data?

I have some 16S RNA sequence with which I want to do the phylogenetic analysis, so Initially I did BLAST against SILVA db and NACBI 16S db and went for MSA in MEGA-X using Muscle and Clustal both...

22 July 2019 9,472 3 View

While using R.E.D tools for charge calculation how to use Gaussian in the place of GAMESS? I have the file.p2n file and file.log ??

I have obtained the file.log after geometry optimisation done using GAUSSIAN and I do have the file.p2n after running Ante_RED-1.5.pl then I am getting an error of not having GAMESS while I wanna...

05 April 2019 4,366 1 View

Can anyone suggest how to incorporate GLYCAM parameters to build a sugar residue's .frcmod file using ambertool I'm missing out bond,angle parameters?

I tried building topology file using leap program but it failed while checking the file and tallying it with my generated . frcmod file isn't working to fill the missing parameters so how can I...

22 March 2019 341 1 View