Sushmitha T J

4 Questions 7 Answers 0 Followers

Questions related from Sushmitha T J

What are the possibilities of your sequences not getting properly binned?

I extracted metagenomic DNA from sediment samples using the PowerSoil kit and performed shotgun sequencing (2×150 bp) on a NovaSeq platform, yielding approximately 40 million high-quality reads...

12 June 2025 6,603 6 View

Whats wrong with the Illumina sequencing?

I recently performed Illumina shotgun sequencing and my fastqc data is as attached. is this correct?

02 April 2024 3,424 6 View

How can we analyze data of non-targerted metabolome obtained from lcms orbitrap using mzmine?

I am working on non-targeted metabolomics of marine samples wherein I am interested in constructing metagenome metabolite network. I am facing problem in metabolome analysis using mzmine.

19 December 2023 7,192 0 View

What is virtual long-read and physical long-read?

I know "virtual (SLR and linked reads) and physical (ONT and PacBio) long reads" this category. But exactly what it is and why they are called so?

13 September 2023 6,613 1 View