Suba Venkat

4 Questions 4 Answers 0 Followers

Questions related from Suba Venkat

Is it reliable to do peptide structure prediction in Pepfold server? Does it need any refining for further use in docking ?

I have novel peptide sequences of 20-30 AA in length. I need to dock it with antigenic proteins. I have to do blind docking of the protein and peptide. I used Cluspro for which I predicted the...

09 June 2021 4,261 3 View

How to dock the novel antimicrobial peptide of sequence length greater than 20 with target pathogens?

I have to dock my peptides (AMP) with pathogen proteins. Is there any database which has pathogenic protein structure that can be target for AMPs or Is there any way to find what could be the...

23 May 2021 3,256 0 View

How to check the antimicrobial activity of the peptide that is in powder form ?

I have peptides that are synthesized in powder form from the sequence predicted through bioinformatic tools. I need to check its antimicrobial activity by antimicrobial susceptibilty assay. I need...

08 May 2021 193 6 View

Cluspro or Patchdock

Which server is best to use, reliable and easy to analyse the results in case of protein peptide docking?

01 January 1970 6,773 4 View