Steffen Lynge Jørgensen

4 Questions 2 Answers 0 Followers

Questions related from Steffen Lynge Jørgensen

Reduction of host DNA "contamination"?

I am extracting bacterial DNA from food samples for 16S sequencing; processed foods, ready to eat products, meat etc. We have a problem with high levels of host DNA, especially soy DNA, which...

13 September 2018 4,213 4 View

Does anyone know a software for fucntional analysis of SNPs

Hey everyone I would like to make a description of the genes affected by SNPs. I have a long list of the locations of SNPs in my reference genome. I have my Prokka output, so i have the annotated...

21 June 2017 7,916 3 View

CATPCA package for R (PCA on dichotomous variables)?

Hi Does anyone know if theres a R package which can handle categorical principal component analysis, CATPCA? I have dichotomous variable data id like to analyse.

15 July 2016 6,100 2 View

Is it possible for E. faecalis strains with several different PFGE types to be the same MLST type?

I have PFGE typed alot of E. faecalis strains. They have obvious different patterns. I have furthermore typed them with MLST. Several of the different PFGE patterns share the same MLST type. Is...

29 July 2015 7,920 3 View