Srdjan Masirevic

3 Questions 4 Answers 0 Followers

Questions related from Srdjan Masirevic

Visualizing protein-ligand interactioin with LIGPLOT or any other suitable software?

Hello, I have use DOCK to dock 10 ligands into the protein structure. I want to generate a pdb file that contains all 10 binding modes of the ligands together with the protein. So all together...

09 April 2020 6,952 3 View

How to dissolve specific hydrophobic inhibitor (potential drug) for crystallization purposes?

I am running experiment where I am trying to crystallize the complex of one protein and potential inhibitor, but I am having problem dissolving inhibitor in different organic solvents, therefore I...

24 May 2019 5,487 0 View

Analysis to compare docking score of multiple structure of the same protein?

Hello, I am docking same compounds to multiple structures of the same protein (but different crystal ligand) with DOCK. After doing some analysis I get difference in docking result between the...

01 January 1970 9,555 5 View