Snehal Karpe

3 Questions 12 Answers 0 Followers

Questions related from Snehal Karpe

Which is the best method of doing transcriptome assembly of samples of various tissues and also those collected from different geographical locations?

Consider samples from tissues A and B of a species X collected from geographical location 1 and samples from the same tissues A and B collected from geographical location 2. If we are to do...

19 January 2018 4,413 4 View

What are the best practices to model structure of an insect olfactory / odorant receptor (computationally) according to you?

Kindly suggest your views on the topic. Please provide references wherever possible.

19 August 2017 5,198 7 View

Which is the best free genome annotation editor that can give output in gff3/gtf file/s compatible with RNAseq analysis tools (e.g. STAR)?

I need to include new genes, pseudogenes and modify gene/intron-exon boundaries of few genes in the available annotations from NCBI. GFF3 files follow complex format which is very difficult to...

30 September 2015 3,184 10 View