Parisa Farrokh

7 Questions 12 Answers 0 Followers

Questions related from Parisa Farrokh

Is it possible to limit the result of BLAST to transcripts of the special tissue?

"bioinformatics" , "real-time PCR" , "primer design"

20 January 2015 5,878 3 View

Why should amplified fragments from AFLP be analyzed on denaturing polyacrylamide gel?

See above

12 November 2014 7,688 3 View

Any advice on how to predict intermolecular interaction in a homodimer protein?

I used ZDOCK and HADDOCK for prediction of dimer structures, but how can I understand the type of interactions between atoms in the dimer protein?

18 December 2013 1,278 4 View

Can anyone explain the eye color in Drosophila melanogaster control by multiple alleles or polygenes?

As I know several genes (like: brown, scarlet, white,...) affect on the eye color in Drosophila melanogaster. On the other hand, eye color in Drosophila was explained as multiple allele...

07 December 2013 7,140 9 View

It is appropriate to use a protein model made by homology modeling as a template for modeling of the protein mutant?

I've made a model for a protein by Modeller and its quality was checked. Now, I want to know that it is possible to use the model for homology modeling of the protein variants, or I should use...

29 August 2013 5,798 2 View

How should I interpret Circular dichroism (CD) results?

I’ ve made some mutants from a native protein and checked their CD spectrum in far-UV in order to find out whether their secondary structures are different form native form or not. I used CDNN for...

01 August 2013 8,805 10 View

Modeling a chimeric protein with modeller

I want to use Modeller for modeling a chimeric protein with two known templates, but I have some problems with the command line. I don’t know how to write it. Is there anyone who can help me? For...

11 January 2013 1,305 4 View