Naiem Issa

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Questions related from Naiem Issa

How do You Perform a Proper RMSD Analysis of Molecular Dynamics Trajectory (NAMD)?

Hello ResearchGate,For my learning purposes, I have conducted an MD simulation on a small protein without ligands/co-factors (minimized, equilibrated 2 ns, production run 10 ns on CUDA Windows)...

06 March 2017 5,289 9 View

Is there any open-source software for creating receptor-based pharmacophore hypotheses in the absence of ligands and screening of ligand libraries?

I have a crystal structure of a protein without any knowledge of ligand and would like to create a receptor-based pharmacophore model for screening.

15 November 2013 3,208 0 View