Muthusamy Muthusamy

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Questions related from Muthusamy Muthusamy

What is misc_RNA?

Hi all I am doing transcript annotation of which i found one transcript was represented as chloroplast envelope membrane -like (LOC104000161) transcript variant misc_RNA. I am not aware what it...

10 October 2017 8,429 3 View

Can misc_RNA encode functional proteins?

Hi all I have some basic doubt about misc_RNA. Can miscellaneous RNA code for functional product/proteins? Thanks

10 October 2017 3,569 3 View

Dear All, How to extract intronic sequences present in intron retained transcripts of RNA seq data?

I am working on RNA seq data (For banana plant) and we predicted that Intron-retention ( Alternative splicing) is predominately occurred. However, i need to extract intronic sequences from these...

07 July 2017 5,636 12 View

Should gene selection be chromosome specific for over expression studies in plant system?

Hi all Actually my gene of interest (same class) present in 5 different chromosomes of my plant. But our transcriptome study revealed that CDS of my gene is from chromosome 3. should i amplify...

12 December 2016 8,298 11 View