Muhammad Fahim

2 Questions 11 Answers 0 Followers

Questions related from Muhammad Fahim

How to extract sequences for different isoforms of a gene from RNAseq?

I have finished pair-end RNAseq analysis using Tuxedo Protocol. Now I need to extract sequences of different isoforms of a gene from my samples (a total of 6). How should I proceed?. I have *.bam,...

07 July 2015 7,375 0 View

What is the best windows-based app for viewing splicing graphs? And predicting alternative splicing and splicing regulatory elements?

I am not bioinformatician but I am comfortable with the applied side of this field using various tools, mainly windows-based. I have .bam files of my RNAseq data. I have been able to get almost...

11 November 2012 6,658 3 View