Mohammad Azhar Aziz

4 Questions 13 Answers 0 Followers

Questions related from Mohammad Azhar Aziz

Why can't an anonymous peer review model be followed?

The manuscript that comes for review has its authors and affiliations mentioned which is a source of bias that can impact the review process. Why don't we just send the manuscript without...

11 November 2013 1,535 8 View

Is it possible to carry out eQTL (expression quantitative trait loci) analysis by comparing tumor and normal samples? If yes, please suggest the tools

I have the following data: - cytogenetics microarray data (cytoscan HD from affymetrix) from 20 patients each having tumor-normal pair, so a total of 40 arrays. - exon array (Exon 1.0 ST from...

04 April 2013 4,584 0 View

Can anyone please suggest the best program/strategy to do patient wise tumor normal comparison at chromosomal and gene expression level?

I have extracted DNA and RNA from the same set of sample (Tumor and normal biopsy) and used them to run Cytoscan HD and Exon arrays. Now we want to do patient wise analysis for cytogenetic events...

03 March 2013 6,915 1 View

Can anyone explain how to carry out patient wise tumor-normal comparison of gene expression array results, without replicates?

I have used Affymetrix exon 1.0 ST array to generate expression data from tumor and normal samples from the same patient. But there are no replicates. We want to do patient wise comparisons. If...

03 March 2013 3,791 17 View