Mohamad Koohi-Moghadam

6 Questions 14 Answers 0 Followers

Questions related from Mohamad Koohi-Moghadam

Is that a good approach to use cancerous cell line to check the toxicity of the compounds?

Dear Friends, I saw in many papers which the authors used cancerous cell line to check the toxicity of the small molecules by measuring the cell growth. I am wondering if using cancerous cell...

10 October 2018 8,663 2 View

What is the cheapest and fastest experiments to find protein-ligand interaction?

Dear friends, We have a bunch of small molecules (around 20) and purified protein as potential target. I am wondering what is the fastest and cheapest experiments to find if there is any...

10 October 2018 3,725 28 View

Computational approach to evaluate metal ion-protein interaction?

I want to find a tool to do computational evaluation on metal ion-protein interaction to find its stability. Actually I wanna to compare different ions-protein interaction stability. I would be so...

02 February 2017 8,970 3 View

Using molecular dynaimc to find which ions bind to the receptor faster and more stable?

I have a protein and want to know which one of the Fe, Zn or As ions bind to the receptor faster. I am wondering if I can use molecular dynamic tools such as GROMACS to find which one of these...

02 February 2017 7,474 5 View

Is there any standalone tool to produce CHARMM force field for small molecules to use in GROMACS?

As far as I know, the following webserver can be used to find the CHARMM force field for small molecules for use in GROMACS http://www.swissparam.ch/ I am wondering if there is any standalone...

12 December 2016 844 3 View

Is there any computational tools to study interaction between small molecules and metal ions?

Hi all, Is there any computational tools to study interaction between small molecules and metal ions? I want to know if a small molecule can be a metal chelator or not? Actually I want to find a...

01 January 2016 3,817 5 View