Manish Paul

3 Questions 2 Answers 0 Followers

Questions related from Manish Paul

Acceptable Range of difference of two isoelectric point?

Hi All, I have a following question: How much difference of isoelectric point between a wild type and mutant protein ca be accepted? E.g. The isoelectric points of my target wild type protein...

02 April 2024 1,829 0 View

Which would be the best option for using refcoord_scaling in GROMACS?

Hi, I am running a MD simulation using pressure coupling with absolute position restraints. after executing the command, "gmx grompp -f npt.mdp -c nvt.gro -t nvt.cpt -p topol.top -o npt.tpr"...

15 August 2015 8,236 3 View

How can I find a standard PDB from a specific temperature simulation for analysis ??

I want to analyze the deviation of salt bridge length in different temperature gradient of a protein. I have run the protein simulation for 100ns, where I have got 100 different pdbs. But I need a...

16 May 2015 5,951 3 View