Kalani Jayanetti

3 Questions 9 Answers 0 Followers

Questions related from Kalani Jayanetti

Why there are two protein chains in Glucocorticoid receptor - DNA binding domain?

Hi, I'm doing a MD study about DBD of Glucocorticoid receptor. Why do it have two Zn motifs ( protein chains)? Both have same function or different functions? What is the importance of having two...

30 August 2017 2,670 3 View

Molecular Dynamics of DNA using the AMBER force field?

Hi, I'm working on a research about structural changes of DNA. When doing the Molecular Dynamics of DNA molecule using AMBER force field ,two strands get separated. why is it? How can I do a...

19 August 2017 7,160 17 View

How to do a Molecular Dynamics simulation for DNA molecule without constraint it?

how to do a MD simulation for DNA molecule using AMBER force field in GROMACS? And how to make an one itp file for two complementary strands of DNA?

17 August 2017 7,305 5 View