Jayaram Chikkerur

6 Questions 22 Answers 0 Followers

Questions related from Jayaram Chikkerur

How to analyze the MD trajectories before and after enzyme-substrate binding?

I did MD simulation of enzyme-substrate complex using GROMOS96 43a1 force field for 1ns of about 500000 steps. I need to analyze the MD trajectories before and after enzyme-substrate binding. Is...

12 December 2017 4,958 4 View

What is the best method for MD simulation of best pose docked enzyme substrate complex?

I have doubts which I myself need to be clarified to setup the MD simulations more accurately 1. Is it possible to carryout MD simulations of best posed docked enzyme substrate complex? if so,...

12 December 2017 2,005 12 View

Does Fungi expresses endoinulinase and invertase at same time?

At an instance, does fungi produces both endoinulinase and invertase?

05 May 2017 8,729 0 View

What is the fate of the inulin in the culture media (broth) after autoclaving?

Will it retain its Degree of Polymerization or it degrades to shorter fragments

04 April 2016 1,682 3 View

Is there any method to easily predict the presence or absence of a protein in a partially characterized organism through bioinformatics approaches?

Please help

01 January 2016 2,041 0 View

I have 16S amplicon illumina data where barcode and primer sequences were removed; how to use this data for qiime analysis?

I have 16S amplicon illumina data where barcode and primer sequences were removed. How to use this data for qiime analysis?

12 December 2015 9,413 10 View