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Questions related from Ilya V Kublanov
I have a set of short peptide sequences (~5-20 aa) and need to map all of them (in batch mode) on a local nucleotide/protein database. Any idea how to do this?
05 May 2019 5,886 2 View
The question is in the title: how one can highlight specific residues in the alignment/sequence in Geneious. Geneious can do it itself using several algorithms (agreements, disagreements etc.) but...
05 May 2018 1,910 1 View
Can anybody suggest an approach of testing the root for phylogenetic tree, for which one cannot add a reliable outgroup. We assume that the general topology of the tree is correct, but need to...
08 August 2016 5,440 4 View
does anyone know an online pairwise identity-based sequence filtering software? I`m using cd-hit but sometimes it is not working or proceeds slowly. Sure, it is possible to use an off-line cd-hit,...
09 September 2015 9,017 2 View
