Herna de Wit

2 Questions 3 Answers 0 Followers

Questions related from Herna de Wit

Why does my RMSD graphs in Bio3d (R) contain a jump and keep increasing?

Hello everyone, I have run an MD simulation on a protein using Gromacs, and converted the .xtc file to .pdb using the following command gmx trjconv -f md.xtc -s md.tpr -o protein.pdb -dt 1000...

06 June 2019 2,096 1 View

Are there any web servers available to run MD simulations?

I need to run Molecular Dynamics simulations on a complete nucleosome structure, which is a big system. I am struggling to find the adequate resources to do MD simulations on this combined protein...

04 April 2019 879 4 View