Hi there, I need a synteny of a ~10kb regions of several related species that have non-annotated genomes. Does anyone know a program to do that?

The genomes are not annotated, so tblastx or tblastn has to be used to generated the alignment for matching orthologs genes. The only softwareI know is ACT Artemis, which unfortunately does not...

10 March 2017 3,496 2 View