Ghada Osman

3 Questions 6 Answers 0 Followers

Questions related from Ghada Osman

Which program can be used to visualize interaction of protein surface with solvant molecules?

I need an easy free program for visualization of protein solvent interaction. which software do you recommend for this?

29 March 2016 1,379 3 View

MD simulation using gromacs, using the command gmx solvate?

I am simulating a protein in a mixture of water and pyridine as a cosolvent I generated a box of water+py using packmol software can someone tell me what exactly the steps I need to do solvate on...

15 February 2016 2,612 7 View

Is it possible to perform MD simulation of a protein with 532 amino acid in water and in organic solvent?

I am studying the effect of organic co-solvents on the activity of enzymes, I want to perform short MD simulation. Is it possible to simulate large proteins in water or organic solvents using...

16 November 2014 1,187 5 View