Frederico Schmitt Kremer

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Questions related from Frederico Schmitt Kremer

I have developed a python package to combine results from multiple classifiers (eg: signal peptide, beta-barrel fold). Can you give me a feedback?

Hello everyone! A few years ago i have developed an algorithm to combine the results from multiple classifiers (ex: signal peptide predictors, beta-barrel predictors) in a consensus by using an...

24 August 2020 5,793 3 View

Compare the core-genome mutations of lineages and identify genes associated with lineage-specific adaptation: it this a valid approach?

I want to analyze mutations in the core-genome of Xanthomonas oryzae, a bacteria species that comprises two pathovars: pv. oryzae and pv. oryzicola. I already have the core-genome identified...

31 January 2018 1,185 1 View

Does anyone know which tool might be a faster alternative to BLAST in DNA-DNA searches?

I need a tool that must be faster, but not necessarily as sensitive, than BLAST in searches of DNA sequence against a DNA database. I know some tools such as Diamond, which is much faster than...

02 January 2018 3,057 2 View

A pipeline for prediction and annotation of obelisks

Hello everyone! I have created a pipeline for the prediction and annotation of obelisks, the newly discovered class of viroid-like elements...

01 January 1970 9,189 0 View