Fahimeh Ghasemi

3 Questions 1 Answers 0 Followers

Questions related from Fahimeh Ghasemi

How can I simulate interaction of lipid bilayer and with a glycoprotein using gromacs?

I am trying simulate interaction of a blood coagulation factor (a glycoprotein) with lipid bilayer using gromacs. As I know I have to parameterize glycan. But I don't know how to do that, Is any...

01 January 2016 197 3 View

How can I do MD simulation for proteins containing ions in their structure?

I am doing MD simulation for Gla domain of factor IX (45aa) using gromacs and gromos force field. Gla domain contains 12 gamma carboxy glutamic acids and 12 Ca2+ ions. The input pdb file for...

08 August 2015 801 3 View

How can I transfect suspended CHO cells with freestyle max reagent efficiently?

I am working on the gene expression in suspended CHO cells, but these cells are not efficiently transfected with freestyle Max reagent, the transfection rate is lower than 50%. How can I improve it?

09 September 2014 8,053 3 View