Aparna Islam

6 Questions 9 Answers 0 Followers

Questions related from Aparna Islam

Can anyone provide me with scientific papers in regard to external and internal transmembrane regions in a membrane protein?

I've used PSIPRED to to attain the secondary structure of particular integral membrane protein. There are long stretches of Alpha Helices and there are certain beta strands which are linked to...

06 June 2015 4,677 2 View

What does the OPTIMIZE button do in EasyModeller?

I've generated a model for a protein using EasyModeller, but I would like to know what is the function of the OPTIMIZE button? Any response would be greatly appreciated. Thank you.

05 May 2015 2,392 3 View

Can anyone explain the DOPE profile that I have generated?

I have generated a model using EasyModeller and following so I have generated a DOPE profile using the model and template. Pink line indicates the model and the orange line depicts the...

05 May 2015 6,576 3 View

What is energy minimization of protein models and what tools can be used?

Hi. I would like to understand what is meant by energy minimization in case of protein models. I've recently started learning about homology modeling. Furthermore, I would like to know what tools...

05 May 2015 7,707 5 View

Can anyone explain to me what MolProbity does?

Furthermore, I would like to know if the new hydrogen added and optimized model is to be used for evaluation or should I keep on working with the original model? Thank you.

05 May 2015 7,194 2 View

Can anyone tell me what mycotoxin(s) is/are present in Cercospora arachidicola and in Cercosporidium personatum?

Mycotoxin(s) produced by Cercospora arachidicola and in Cercosporidium personatum?

11 November 2012 6,689 1 View